Allow pre-built genome indices as input

BIMSBbioinfo / pigx_rnaseq

Bulk RNA-seq Data Processing, Quality Control, and Downstream Analysis Pipeline

GNU General Public License v3.0

20 stars 11 forks source link

Allow pre-built genome indices as input #100

Open borauyar opened 2 years ago

borauyar commented 2 years ago

It would be useful to allow the users to pass the pre-built genome indices (hisat2/star) to be passed as input to the pipeline so that the pipeline doesn't spend time/memory/disk space for genome indexing.