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pigx_rnaseq
Bulk RNA-seq Data Processing, Quality Control, and Downstream Analysis Pipeline
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add a module for gene-set enrichment analysis
#129
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borauyar
opened
2 years ago
borauyar
commented
2 years ago
We could do standard gene-set enrichment analysis as done in e.g. GAGE
We could use single-sample gene-set scoring using (e.g. singscore)
A similar approach is to find out which cell types are driving the differential expression (see
LRcell
)