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BIMSBbioinfo / pigx_rnaseq

Bulk RNA-seq Data Processing, Quality Control, and Downstream Analysis Pipeline
GNU General Public License v3.0
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expose STAR's optional tool arguments to the user #44

Closed borauyar closed 6 years ago

borauyar commented 6 years ago

We need to remove all default optional arguments from hard-coded tool commands and put them in the default settings.yaml file that is generated via pigx rnaseq --init

borauyar commented 6 years ago

expose all default tool arguments to the user