If the differential transcript analysis is done with DESeq2 interpretation is rather difficult, as only single transcript changes are captured and aggregated gene-wise results have to be manually extracted from the saved results table.
DRIMSeq, on the other hand, captures changes on the isoform level while respecting the grouping per gene.
If the differential transcript analysis is done with DESeq2 interpretation is rather difficult, as only single transcript changes are captured and aggregated gene-wise results have to be manually extracted from the saved results table. DRIMSeq, on the other hand, captures changes on the isoform level while respecting the grouping per gene.