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BIMSBbioinfo / pigx_scrnaseq

Pipeline for analysis of Dropseq single cell data
http://bioinformatics.mdc-berlin.de/pigx
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make iSEE/singleCellTK package work nicely with sce object produced by the pipeline #29

Open frenkiboy opened 6 years ago

frenkiboy commented 6 years ago

this can be used as an alternative https://bioconductor.org/packages/release/bioc/vignettes/singleCellTK/inst/doc/v01-Introduction_to_singleCellTK.html#run-the-shiny-app