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BIOP
/
bigdataviewer-biop-tools
Another repo for bdv tools.
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Parameter not recorded
#65
NicoKiaru
opened
1 week ago
0
Refactor registration to allow for registration batching
#64
NicoKiaru
closed
3 months ago
0
Expose X Y and Z voxel sizes and confirm units
#63
lacan
closed
4 months ago
1
handle case of already existing XML file
#62
lacan
closed
4 months ago
0
Change CZI to BigStitcher input to specify XML rather than output folder
#61
lacan
closed
4 months ago
0
Missing sources in bdvs
#60
NicoKiaru
closed
4 months ago
16
Read RGB from OMERO as RGB image
#59
NicoKiaru
opened
8 months ago
0
Add smooth average in fuse and resample sources
#58
NicoKiaru
closed
9 months ago
0
In RegisterWholeSlideScans2DCommandm there are hardcoded parameter
#57
NicoKiaru
closed
9 months ago
0
Warpy: make it batchable
#56
NicoKiaru
opened
10 months ago
2
Warpy: export registered sections broken
#55
NicoKiaru
opened
10 months ago
1
BigStitcher - no overlap detected
#54
NicoKiaru
opened
1 year ago
0
Warpy: putting points for registration is super annoying on MAC
#53
NicoKiaru
opened
1 year ago
0
LLS7 opening and cropping
#52
NicoKiaru
opened
1 year ago
0
Warpy export broken
#51
NicoKiaru
closed
11 months ago
1
Operetta command : check the alternate xml file name
#50
NicoKiaru
closed
11 months ago
1
z voxel size has an influence over the resolution level picked
#49
NicoKiaru
opened
1 year ago
0
add explicit resolution level in current bdv view to imageplus
#48
NicoKiaru
opened
1 year ago
0
Adds a way to precompute sparsely transformation fields and linearly interpolate them
#47
NicoKiaru
closed
2 years ago
0
Cannot get current bdv view when overlays are present
#46
NicoKiaru
closed
2 years ago
0
Cannot get current bdv view when time shifted sources are present
#45
NicoKiaru
closed
1 year ago
1
Z location not right in BigStitcher to OME TIFF exporter
#44
NicoKiaru
closed
8 months ago
1
Operetta opener do not sort by field and wells anymore
#43
NicoKiaru
closed
1 year ago
1
Rotation3DTransformCommand does not seem to do anything
#42
manerotoni
closed
8 months ago
7
[Fuse a BigStitcher dataset to OME-Tiff] Figure Sampling Rate for XY Z and Ratio
#41
lacan
closed
2 years ago
1
Fuse BigStitcher to OME-TIFF: Rounded numbers in GUI
#40
lacan
closed
2 years ago
1
CI: cache ~/.m2/repository correctly
#39
ctrueden
closed
2 years ago
0
Overflow with 16 bits value in fusion
#38
NicoKiaru
closed
10 months ago
1
Allow multi channel display on Warpy
#37
NicoKiaru
closed
2 years ago
1
Fuse and resample does not take the good tiled downsampling (make this limit less all or nothing)
#36
NicoKiaru
closed
2 years ago
1
Improve DemoEllipticalSource
#35
tischi
closed
2 years ago
4
Elliposid transform axis names
#34
tischi
opened
2 years ago
6
Support reading pixel size for rotated image servers
#33
NicoKiaru
closed
2 years ago
1
Makes a warning when erasing file
#32
NicoKiaru
closed
2 years ago
0
Make a script that starts bigStitcher from an operetta dataset
#31
NicoKiaru
closed
2 years ago
1
Export ImagePlus with more than one time point crashes
#30
tischi
closed
2 years ago
20
wrong comment?
#29
tischi
closed
2 years ago
2
Ellipsoid Transform Singular Matrix Error
#28
tischi
closed
2 years ago
5
Fixes #7 Change Ellipsoid Parameter Names
#27
tischi
closed
2 years ago
7
Ellipsoid transform names
#26
tischi
closed
2 years ago
2
Ellipsoid exported ImagePlus coordinates do not match BDV coordinates
#25
tischi
closed
2 years ago
4
Display imported ellipse
#24
tischi
closed
2 years ago
1
Timepoint slider bug?
#23
tischi
closed
2 years ago
9
Elliposid distance computer
#22
tischi
opened
2 years ago
6
Elliposid transform IO Fixes #19
#21
tischi
closed
2 years ago
0
Add origin to exported ImagePlus
#20
tischi
closed
2 years ago
10
Load and save ellipsoid transforms
#19
tischi
closed
2 years ago
4
Voxel size in elliptic transformed image
#18
tischi
opened
3 years ago
4
Improvements
#17
NicoKiaru
opened
3 years ago
1
Virtual slice not updating slice 1
#16
NicoKiaru
opened
3 years ago
0
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