List of publicly available CZI files to test against this reader - Githubissues

BIOP / quick-start-czi-reader

A bio-formats image reader for CZI that starts faster

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List of publicly available CZI files to test against this reader #1

Closed NicoKiaru closed 1 year ago

NicoKiaru commented 1 year ago

List of publicly available czi files:

https://zenodo.org/record/7129425 (plate)
https://zenodo.org/record/7254229
https://zenodo.org/record/4662053 (Airyscan and unprocessed Airyscan)
https://zenodo.org/record/6848342 (Airyscan)
https://zenodo.org/record/7015307 (demo camera images by Sebastien Rhode)
https://zenodo.org/record/7254229
https://zenodo.org/record/7117784 (lattice lightsheet dataset)
https://zenodo.org/record/7147844 (plate)
https://zenodo.org/record/7260610
https://zenodo.org/record/5101351
https://zenodo.org/record/3991919 (multi scene)
https://zenodo.org/record/7430767
https://rodare.hzdr.de/record/1849 (zipped parts)
https://downloads.openmicroscopy.org/images/Zeiss-CZI/ (thanks @dgault)

I'll edit this comment to add more dataset

What's missing for sure:

Multi part file (different angles)
PALM

NicoKiaru commented 1 year ago

Tested files are in https://github.com/BIOP/quick-start-czi-reader/blob/b3270b6b4ed2c538614b1e76a7121ff3fdb449c3/src/test/java/ch/epfl/biop/formats/in/CompareReader.java#L734-L794