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BIRSBiointegration / Hackathon

Multi-omics studies are available here
GNU General Public License v3.0
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adding CV-MOFA vignette #3

Closed mikelove closed 4 years ago

aljabadi commented 4 years ago

Hi @mikelove. This does not seem to be reproducible.

mikelove commented 4 years ago

I just removed all hard coded paths. These were just pointing to files that are in the repository.

We won't be able to make the Rmd run from scratch on a fresh machine, but all the inputs and output are stored in the repo and all the code that was used in our benchmark is provided.

aljabadi commented 4 years ago

For consistency, I compiled the provided source code and output data files (the actual run is not being performed) to generate this semi-automated vignette. It would be great if you could make any changes you'd like, or let me know if you're happy to use this one. Obviously, having it run in full is even better.

mikelove commented 4 years ago

Thanks! This looks great!

On Tue, Jul 21, 2020 at 12:53 AM Al J Abadi notifications@github.com wrote:

For consistency, I compiled the provided source code and output data files (the actual run is not being performed) to generate this semi-automated vignette https://ajabadi.github.io/BIRSBIO2020.Benchmarking.CVmofa/index.html. It would be great if you could make any changes you'd like, or let me know if you're happy to use this one.

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