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BRCAChallenge
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brca-exchange
Overall management and deployment of the BRCA Exchange web portal and pipeline scripts
http://brcaexchange.org
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Merge pull request #1474 from BRCAChallenge/update_seqrepo
#1475
melissacline
closed
10 months ago
0
Update seqrepo
#1474
melissacline
closed
10 months ago
0
Update automate_spliceai branch
#1473
melissacline
closed
11 months ago
0
Repair vrids
#1472
melissacline
closed
11 months ago
0
Switched ESP processing to downloading of static data
#1471
melissacline
closed
11 months ago
0
Fixed an Improper Method Call: Replaced `mktemp` with `mkstemp`
#1470
fazledyn-or
closed
11 months ago
0
Fixed bug that caused splice_ai and bayesdel scores to not be shown f…
#1469
melissacline
closed
1 year ago
0
"Show Detail View" causes deleted variants to have blank page
#1468
e-t-k
opened
1 year ago
1
Moved the splice AI output VCF file from the discard list to the keep…
#1467
melissacline
closed
1 year ago
0
Taking another tactic for removing the temp file
#1466
melissacline
closed
1 year ago
0
Gnomad process refactor
#1465
melissacline
closed
1 year ago
0
Changed the label for the GA4GH VRS ID
#1464
melissacline
closed
1 year ago
0
Updated for the current versions of seqrepo-rest-api and VRS
#1463
melissacline
closed
1 year ago
0
Moved the deletion of the ready_for_priors file until the task *after…
#1462
melissacline
closed
1 year ago
0
Pipeline utils extension
#1461
melissacline
closed
1 year ago
0
Pipeline utils extension
#1460
melissacline
closed
1 year ago
0
Added a temporary task to bypass a problem variant before calculating…
#1459
melissacline
closed
1 year ago
0
Update banner
#1458
melissacline
closed
1 year ago
0
Repairvrids
#1457
melissacline
closed
1 year ago
0
Updated the location of the database dump
#1456
melissacline
closed
1 year ago
0
Changed the message to a server upgrade warning
#1455
melissacline
closed
1 year ago
0
Fixed bug in splice_ai data parsing, which was leading to results of NaN
#1454
melissacline
closed
1 year ago
1
Update requirements.txt
#1453
melissacline
closed
1 year ago
0
Lifted the restriction of germline variants from ClinVar, in order to…
#1452
melissacline
closed
1 year ago
0
Bump minimist, mkdirp, handlebars, loader-fs-cache, mocha, webpack and webpack-dev-server in /website
#1451
dependabot[bot]
closed
2 weeks ago
1
Bump ipython from 7.8.0 to 8.10.0 in /website/content/api_docs
#1450
dependabot[bot]
closed
2 weeks ago
1
Bump ipython from 7.13.0 to 8.10.0 in /pipeline
#1449
dependabot[bot]
closed
2 weeks ago
1
Bump ua-parser-js from 0.7.21 to 0.7.33 in /website
#1448
dependabot[bot]
closed
2 weeks ago
1
Iterparse fix
#1447
melissacline
closed
1 year ago
0
Bump ua-parser-js from 0.7.21 to 0.7.32 in /website
#1446
dependabot[bot]
closed
1 year ago
1
rem unnecesarry import
#1445
zfisch
closed
1 year ago
0
add survey link at top of page
#1444
zfisch
closed
1 year ago
0
Bump flat and mocha in /website
#1443
dependabot[bot]
closed
2 weeks ago
1
Bump express from 4.17.1 to 4.18.2 in /website
#1442
dependabot[bot]
closed
2 weeks ago
1
Bump certifi from 2019.9.11 to 2022.12.7 in /website/content/api_docs
#1441
dependabot[bot]
closed
2 weeks ago
1
Bump certifi from 2019.11.28 to 2022.12.7 in /pipeline
#1440
dependabot[bot]
closed
2 weeks ago
2
Bump certifi from 2018.11.29 to 2022.12.7 in /website
#1439
dependabot[bot]
closed
2 weeks ago
1
Bump qs from 2.4.1 to 6.2.4 in /website
#1438
dependabot[bot]
closed
2 weeks ago
1
Bump decode-uri-component from 0.2.0 to 0.2.2 in /website
#1437
dependabot[bot]
closed
2 weeks ago
1
Bump tensorflow from 2.9.1 to 2.9.3 in /pipeline
#1436
dependabot[bot]
closed
2 weeks ago
2
Bump loader-utils from 0.2.17 to 1.4.2 in /website
#1435
dependabot[bot]
closed
2 weeks ago
1
Bump loader-utils from 0.2.17 to 1.4.1 in /website
#1434
dependabot[bot]
closed
1 year ago
1
Update Google Analytics tags
#1433
melissacline
closed
8 months ago
1
Bump follow-redirects from 1.10.0 to 1.15.2 in /website
#1432
dependabot[bot]
closed
2 weeks ago
1
Bump eventsource from 1.0.7 to 1.1.2 in /website
#1431
dependabot[bot]
closed
2 weeks ago
1
Package updates
#1430
zfisch
closed
2 years ago
0
Bump d3-color and d3-scale in /website
#1429
dependabot[bot]
closed
2 weeks ago
1
Bump protobuf from 3.1.0 to 3.18.3 in /website
#1428
dependabot[bot]
closed
2 weeks ago
1
Bypassvrids
#1427
zfisch
closed
4 months ago
0
Bump nbconvert from 5.6.0 to 6.5.1 in /website/content/api_docs
#1426
dependabot[bot]
closed
2 weeks ago
1
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