I created a new conda environment, I installed samtools 1.19 for merging and sorting, and then installed bs-seeker2.
When I tried doing the alignment I got the error:
[Error] It seems that you haven't install "pysam" package.. Please do it before you run this script.
In my environment pysam is installed but Bs-seeker2 is not detecting it.
pysam 0.11.2.2 py27_1 bioconda
I had the same problem, created a brand new environment with a brand new installed, and Bs-seeker is failing.
I did installed it in my lab server and it worked ,but the alignment is very slow, but installing in the HPC failed.
How can I fix this?
Hi,
I created a new conda environment, I installed samtools 1.19 for merging and sorting, and then installed bs-seeker2. When I tried doing the alignment I got the error:
[Error] It seems that you haven't install "pysam" package.. Please do it before you run this script.
In my environment pysam is installed but Bs-seeker2 is not detecting it. pysam 0.11.2.2 py27_1 bioconda
I had the same problem, created a brand new environment with a brand new installed, and Bs-seeker is failing. I did installed it in my lab server and it worked ,but the alignment is very slow, but installing in the HPC failed. How can I fix this?
Thanks