When clean module (or finish function) is executed, it fails to remove files named "sample.name".ivar_trim.sorted.bam and "sample.name".ivar_trim.sorted.bam.bai. This files have been added to services.json.
PR checklist
[x] This comment contains a description of changes (with reason).
[ ] Make sure your code lints (black and flake8).
If a new tamplate was added make sure:
[ ] Template's schema is added in templates/services.json.
[ ] Template's pipeline's documentation in assets/reports/md/template.md is added.
[ ] Results Documentation in assets/reports/results/template.md is updated.
[x] CHANGELOG.md is updated.
[ ] README.md is updated (including new tool citations and authors/contributors).
[ ] If you know a new user was added to the SFTP, make sure you added it to templates/sftp_user.json
When clean module (or finish function) is executed, it fails to remove files named "sample.name".ivar_trim.sorted.bam and "sample.name".ivar_trim.sorted.bam.bai. This files have been added to services.json.
PR checklist
black and flake8).templates/services.json.assets/reports/md/template.mdis added.assets/reports/results/template.mdis updated.CHANGELOG.mdis updated.README.mdis updated (including new tool citations and authors/contributors).templates/sftp_user.json