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Caffe: a fast open framework for deep learning.
http://caffe.berkeleyvision.org/
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problem with make or cmake compilation #6116

Open vahidajalluian opened 6 years ago

vahidajalluian commented 6 years ago

I had previously installed anaconda3 v5 , cuda v9.0 and cudnn v7. I wonder what is the problem in making these libraries? this is what I get in cmake

-- The C compiler identification is GNU 5.4.0
-- The CXX compiler identification is GNU 5.4.0
-- Check for working C compiler: /usr/bin/cc
-- Check for working C compiler: /usr/bin/cc -- works
-- Detecting C compiler ABI info
-- Detecting C compiler ABI info - done
-- Detecting C compile features
-- Detecting C compile features - done
-- Check for working CXX compiler: /usr/bin/c++
-- Check for working CXX compiler: /usr/bin/c++ -- works
-- Detecting CXX compiler ABI info
-- Detecting CXX compiler ABI info - done
-- Detecting CXX compile features
-- Detecting CXX compile features - done
-- Looking for pthread.h
-- Looking for pthread.h - found
-- Looking for pthread_create
-- Looking for pthread_create - not found
-- Looking for pthread_create in pthreads
-- Looking for pthread_create in pthreads - not found
-- Looking for pthread_create in pthread
-- Looking for pthread_create in pthread - found
-- Found Threads: TRUE  
-- Boost version: 1.58.0
-- Found the following Boost libraries:
--   system
--   thread
--   filesystem
--   chrono
--   date_time
--   atomic
-- Found GFlags: /usr/include  
-- Found gflags  (include: /usr/include, library: /usr/lib/x86_64-linux-gnu/libgflags.so)
-- Found Glog: /usr/include  
-- Found glog    (include: /usr/include, library: /usr/lib/x86_64-linux-gnu/libglog.so)
-- Found Protobuf: /usr/lib/x86_64-linux-gnu/libprotobuf.so  
-- Found PROTOBUF Compiler: /usr/bin/protoc
-- Found HDF5: /home/vahidajalluian/anaconda3/lib/libhdf5_hl.so;/home/vahidajalluian/anaconda3/lib/libhdf5.so;/usr/lib/x86_64-linux-gnu/librt.so;/usr/lib/x86_64-linux-gnu/libpthread.so;/home/vahidajalluian/anaconda3/lib/libz.so;/usr/lib/x86_64-linux-gnu/libdl.so;/usr/lib/x86_64-linux-gnu/libm.so (found version "1.10.1") 
-- Found LMDB: /usr/include  
-- Found lmdb    (include: /usr/include, library: /usr/lib/x86_64-linux-gnu/liblmdb.so)
-- Found LevelDB: /usr/include  
-- Found LevelDB (include: /usr/include, library: /usr/lib/x86_64-linux-gnu/libleveldb.so)
-- Found Snappy: /usr/include  
-- Found Snappy  (include: /usr/include, library: /usr/lib/x86_64-linux-gnu/libsnappy.so)
-- CUDA detected: 9.0
-- Found cuDNN: ver. 7.0.5 found (include: /usr/local/cuda-9.0/include, library: /usr/local/cuda-9.0/lib64/libcudnn.so)
-- Automatic GPU detection failed. Building for all known architectures.
-- Added CUDA NVCC flags for: sm_20 sm_21 sm_30 sm_35 sm_50 sm_60 sm_61
-- OpenCV found (/usr/share/OpenCV)
-- Found Atlas: /usr/include  
-- Found Atlas (include: /usr/include library: /usr/lib/libatlas.so lapack: /usr/lib/liblapack.so
-- Found PythonInterp: /usr/bin/python2.7 (found suitable version "2.7.12", minimum required is "2.7") 
-- Found PythonLibs: /usr/lib/x86_64-linux-gnu/libpython2.7.so (found suitable version "2.7.12", minimum required is "2.7") 
Traceback (most recent call last):
  File "<string>", line 1, in <module>
ImportError: No module named numpy
-- Could NOT find NumPy (missing:  NUMPY_INCLUDE_DIR NUMPY_VERSION) (Required is at least version "1.7.1")
-- Boost version: 1.58.0
-- Found the following Boost libraries:
--   python
-- Could NOT find Doxygen (missing:  DOXYGEN_EXECUTABLE) 
-- Python interface is disabled or not all required dependencies found. Building without it...
-- Found Git: /usr/bin/git (found version "2.7.4") 
-- 
-- ******************* Caffe Configuration Summary *******************
-- General:
--   Version           :   1.0.0
--   Git               :   unknown
--   System            :   Linux
--   C++ compiler      :   /usr/bin/c++
--   Release CXX flags :   -O3 -DNDEBUG -fPIC -Wall -Wno-sign-compare -Wno-uninitialized
--   Debug CXX flags   :   -g -fPIC -Wall -Wno-sign-compare -Wno-uninitialized
--   Build type        :   Release
-- 
--   BUILD_SHARED_LIBS :   ON
--   BUILD_python      :   ON
--   BUILD_matlab      :   OFF
--   BUILD_docs        :   ON
--   CPU_ONLY          :   OFF
--   USE_OPENCV        :   ON
--   USE_LEVELDB       :   ON
--   USE_LMDB          :   ON
--   USE_NCCL          :   OFF
--   ALLOW_LMDB_NOLOCK :   OFF
-- 
-- Dependencies:
--   BLAS              :   Yes (Atlas)
--   Boost             :   Yes (ver. 1.58)
--   glog              :   Yes
--   gflags            :   Yes
--   protobuf          :   Yes (ver. 2.6.1)
--   lmdb              :   Yes (ver. 0.9.17)
--   LevelDB           :   Yes (ver. 1.18)
--   Snappy            :   Yes (ver. 1.1.3)
--   OpenCV            :   Yes (ver. 2.4.9.1)
--   CUDA              :   Yes (ver. 9.0)
-- 
-- NVIDIA CUDA:
--   Target GPU(s)     :   Auto
--   GPU arch(s)       :   sm_20 sm_21 sm_30 sm_35 sm_50 sm_60 sm_61
--   cuDNN             :   Yes (ver. 7.0.5)
-- 
-- Documentaion:
--   Doxygen           :   No
--   config_file       :   
-- 
-- Install:
--   Install path      :   /home/vahidajalluian/SSD/caffe/build/install
-- 
-- Configuring done
CMake Warning (dev) in src/caffe/CMakeLists.txt:
  Policy CMP0022 is not set: INTERFACE_LINK_LIBRARIES defines the link
  interface.  Run "cmake --help-policy CMP0022" for policy details.  Use the
  cmake_policy command to set the policy and suppress this warning.

  Target "caffe" has an INTERFACE_LINK_LIBRARIES property which differs from
  its LINK_INTERFACE_LIBRARIES properties.

  INTERFACE_LINK_LIBRARIES:

    caffeproto;/usr/lib/x86_64-linux-gnu/libboost_system.so;/usr/lib/x86_64-linux-gnu/libboost_thread.so;/usr/lib/x86_64-linux-gnu/libboost_filesystem.so;/usr/lib/x86_64-linux-gnu/libboost_chrono.so;/usr/lib/x86_64-linux-gnu/libboost_date_time.so;/usr/lib/x86_64-linux-gnu/libboost_atomic.so;/usr/lib/x86_64-linux-gnu/libpthread.so;/usr/lib/x86_64-linux-gnu/libglog.so;/usr/lib/x86_64-linux-gnu/libgflags.so;$<$<NOT:$<CONFIG:DEBUG>>:/usr/lib/x86_64-linux-gnu/libprotobuf.so>;$<$<CONFIG:DEBUG>:/usr/lib/x86_64-linux-gnu/libprotobuf.so>;-lpthread;/home/vahidajalluian/anaconda3/lib/libhdf5_hl.so;/home/vahidajalluian/anaconda3/lib/libhdf5.so;/usr/lib/x86_64-linux-gnu/librt.so;/usr/lib/x86_64-linux-gnu/libpthread.so;/home/vahidajalluian/anaconda3/lib/libz.so;/usr/lib/x86_64-linux-gnu/libdl.so;/usr/lib/x86_64-linux-gnu/libm.so;/home/vahidajalluian/anaconda3/lib/libhdf5_hl.so;/home/vahidajalluian/anaconda3/lib/libhdf5.so;/usr/lib/x86_64-linux-gnu/librt.so;/usr/lib/x86_64-linux-gnu/libpthread.so;/home/vahidajalluian/anaconda3/lib/libz.so;/usr/lib/x86_64-linux-gnu/libdl.so;/usr/lib/x86_64-linux-gnu/libm.so;/usr/lib/x86_64-linux-gnu/liblmdb.so;/usr/lib/x86_64-linux-gnu/libleveldb.so;/usr/local/cuda-9.0/lib64/libcudart.so;/usr/local/cuda-9.0/lib64/libcurand.so;/usr/local/cuda-9.0/lib64/libcublas.so;/usr/local/cuda-9.0/lib64/libcudnn.so;opencv_core;opencv_highgui;opencv_imgproc;/usr/lib/liblapack.so;/usr/lib/libcblas.so;/usr/lib/libatlas.so

  LINK_INTERFACE_LIBRARIES:

    caffeproto;/usr/lib/x86_64-linux-gnu/libboost_system.so;/usr/lib/x86_64-linux-gnu/libboost_thread.so;/usr/lib/x86_64-linux-gnu/libboost_filesystem.so;/usr/lib/x86_64-linux-gnu/libboost_chrono.so;/usr/lib/x86_64-linux-gnu/libboost_date_time.so;/usr/lib/x86_64-linux-gnu/libboost_atomic.so;/usr/lib/x86_64-linux-gnu/libpthread.so;/usr/lib/x86_64-linux-gnu/libglog.so;/usr/lib/x86_64-linux-gnu/libgflags.so;/usr/lib/x86_64-linux-gnu/libprotobuf.so;-lpthread;/home/vahidajalluian/anaconda3/lib/libhdf5_hl.so;/home/vahidajalluian/anaconda3/lib/libhdf5.so;/usr/lib/x86_64-linux-gnu/librt.so;/usr/lib/x86_64-linux-gnu/libpthread.so;/home/vahidajalluian/anaconda3/lib/libz.so;/usr/lib/x86_64-linux-gnu/libdl.so;/usr/lib/x86_64-linux-gnu/libm.so;/home/vahidajalluian/anaconda3/lib/libhdf5_hl.so;/home/vahidajalluian/anaconda3/lib/libhdf5.so;/usr/lib/x86_64-linux-gnu/librt.so;/usr/lib/x86_64-linux-gnu/libpthread.so;/home/vahidajalluian/anaconda3/lib/libz.so;/usr/lib/x86_64-linux-gnu/libdl.so;/usr/lib/x86_64-linux-gnu/libm.so;/usr/lib/x86_64-linux-gnu/liblmdb.so;/usr/lib/x86_64-linux-gnu/libleveldb.so;/usr/local/cuda-9.0/lib64/libcudart.so;/usr/local/cuda-9.0/lib64/libcurand.so;/usr/local/cuda-9.0/lib64/libcublas.so;/usr/local/cuda-9.0/lib64/libcudnn.so;opencv_core;opencv_highgui;opencv_imgproc;/usr/lib/liblapack.so;/usr/lib/libcblas.so;/usr/lib/libatlas.so

This warning is for project developers.  Use -Wno-dev to suppress it.

CMake Error at CMakeLists.txt:104 (add_dependencies):
  The dependency target "pycaffe" of target "pytest" does not exist.

-- Generating done
-- Build files have been written to: /home/vahidajalluian/SSD/caffe/build

and this is what I get in make all

PROTOC src/caffe/proto/caffe.proto
CXX .build_release/src/caffe/proto/caffe.pb.cc
CXX src/caffe/solvers/adadelta_solver.cpp
CXX src/caffe/solvers/sgd_solver.cpp
CXX src/caffe/solvers/nesterov_solver.cpp
CXX src/caffe/solvers/rmsprop_solver.cpp
CXX src/caffe/solvers/adam_solver.cpp
CXX src/caffe/solvers/adagrad_solver.cpp
CXX src/caffe/data_transformer.cpp
CXX src/caffe/layers/sigmoid_layer.cpp
CXX src/caffe/layers/lrn_layer.cpp
CXX src/caffe/layers/threshold_layer.cpp
CXX src/caffe/layers/softmax_loss_layer.cpp
CXX src/caffe/layers/cudnn_softmax_layer.cpp
src/caffe/layers/cudnn_softmax_layer.cpp:4:34: fatal error: thrust/device_vector.h: No such file or directory
compilation terminated.
Makefile:581: recipe for target '.build_release/src/caffe/layers/cudnn_softmax_layer.o' failed
make: *** [.build_release/src/caffe/layers/cudnn_softmax_layer.o] Error 1
Thomio-Watanabe commented 6 years ago

Does the device_vector.h file exists? Check it in /usr/local/cuda/include/thrust/device_vector.h'