Open outlookerr opened 5 years ago
I have finished make all successfully,but I met the error during the make runtest.
I/usr/include/python2.7 -I/usr/lib64/python2.7/site-packages/numpy/core/include -I/usr/local/include -I/usr/include -I/usr/lib/x86_64-linux-gnu/hdf5/serial/include -I.build_release/src -I./src -I./include -I/usr/local/cuda/include -I/opt/intel/mkl/include -Wall -Wno-sign-compare -L/usr/lib64 -L/usr/local/lib -L/usr/lib -L/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu/hdf5/serial -L/usr/local/cuda/lib64 -L/usr/local/cuda/lib -L/opt/intel/mkl/lib/intel64 -L.build_release/lib -lcudart -lcublas -lcurand -lglog -lgflags -lprotobuf -lleveldb -lsnappy -llmdb -lboost_system -lhdf5_hl -lhdf5 -lm -lopencv_core -lopencv_highgui -lopencv_imgproc -lboost_thread -lstdc++ -lcudnn -lmkl_rt -lcaffe -Wl,-rpath,\$ORIGIN/../lib .build_release/src/caffe/test/test_gradient_based_solver.o:在函数‘caffe::MakeTempDir(std::cxx11::basic_string<char, std::char_traits, std::allocator >*)’中: test_gradient_based_solver.cpp:(.text._ZN5caffe11MakeTempDirEPNSt7cxx1112basic_stringIcSt11char_traitsIcESaIcEEE[_ZN5caffe11MakeTempDirEPNSt7cxx1112basic_stringIcSt11char_traitsIcESaIcEEE]+0x77):对‘boost::filesystem::detail::temp_directory_path(boost::system::error_code*)’未定义的引用 test_gradient_based_solver.cpp:(.text._ZN5caffe11MakeTempDirEPNSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEE[_ZN5caffe11MakeTempDirEPNSt7cxx1112basic_stringIcSt11char_traitsIcESaIcEEE]+0xab):对‘boost::filesystem::path::operator/=(boost::filesystem::path const&)’未定义的引用 test_gradient_based_solver.cpp:(.text._ZN5caffe11MakeTempDirEPNSt7cxx1112basic_stringIcSt11char_traitsIcESaIcEEE[_ZN5caffe11MakeTempDirEPNSt7cxx1112basic_stringIcSt11char_traitsIcESaIcEEE]+0x128):对‘boost::filesystem::detail::unique_path(boost::filesystem::path const&, boost::system::error_code*)’未定义的引用 test_gradient_based_solver.cpp:(.text._ZN5caffe11MakeTempDirEPNSt7cxx1112basic_stringIcSt11char_traitsIcESaIcEEE[_ZN5caffe11MakeTempDirEPNSt7cxx1112basic_stringIcSt11char_traitsIcESaIcEEE]+0x166):对‘boost::filesystem::detail::create_directory(boost::filesystem::path const&, boost::system::error_code)’未定义的引用 .build_release/src/caffe/test/test_hdf5_output_layer.o:在函数‘caffe::MakeTempFilename(std::__cxx11::basic_string<char, std::char_traits, std::allocator >)’中: test_hdf5_output_layer.cpp:(.text._ZN5caffe16MakeTempFilenameEPNSt7cxx1112basic_stringIcSt11char_traitsIcESaIcEEE[_ZN5caffe16MakeTempFilenameEPNSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEE]+0x86):对‘boost::filesystem::detail::temp_directory_path(boost::system::error_code*)’未定义的引用 test_hdf5_output_layer.cpp:(.text._ZN5caffe16MakeTempFilenameEPNSt7cxx1112basic_stringIcSt11char_traitsIcESaIcEEE[_ZN5caffe16MakeTempFilenameEPNSt7cxx1112basic_stringIcSt11char_traitsIcESaIcEEE]+0xb9):对‘boost::filesystem::path::operator/=(boost::filesystem::path const&)’未定义的引用 test_hdf5_output_layer.cpp:(.text._ZN5caffe16MakeTempFilenameEPNSt7cxx1112basic_stringIcSt11char_traitsIcESaIcEEE[_ZN5caffe16MakeTempFilenameEPNSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEE]+0x134):对‘boost::filesystem::detail::unique_path(boost::filesystem::path const&, boost::system::error_code*)’未定义的引用 collect2: error: ld returned 1 exit status Makefile:540: recipe for target '.build_release/test/test_all.testbin' failed make: *** [.build_release/test/test_all.testbin] Error 1
I have tried to installed boost,but it does not work well.
This is my Makefile.config
USE_CUDNN := 1
USE_OPENCV := 0 USE_LEVELDB := 0 USE_LMDB := 0
CUSTOM_CXX := g++
CUDA_DIR := /usr/local/cuda
CUDA_ARCH := -gencode arch=compute_20,code=sm_20 \ -gencode arch=compute_20,code=sm_21 \ -gencode arch=compute_30,code=sm_30 \ -gencode arch=compute_35,code=sm_35 \ -gencode arch=compute_50,code=sm_50 \ -gencode arch=compute_50,code=compute_50
BLAS := mkl
BLAS_INCLUDE := /opt/intel/mkl/include BLAS_LIB := /opt/intel/mkl/lib/intel64
PYTHON_INCLUDE := /usr/include/python2.7 /usr/lib64/python2.7/site-packages/numpy/core/include
# $(ANACONDA_HOME)/include/python2.7 \ # $(ANACONDA_HOME)/lib/python2.7/site-packages/numpy/core/include \
PYTHON_LIB := /usr/lib64
INCLUDE_DIRS := $(PYTHON_INCLUDE) /usr/local/include /usr/include /usr/lib/x86_64-linux-gnu/hdf5/serial/include LIBRARY_DIRS := $(PYTHON_LIB) /usr/local/lib /usr/lib /usr/lib/x86_64-linux-gnu /usr/lib/x86_64-linux-gnu/hdf5/serial
pkg-config
BUILD_DIR := build DISTRIBUTE_DIR := distribute
TEST_GPUID := 0
Thanks!
‘未定义的引用’ means ‘undefined reference’
when I cmake Boost 1.46 found but my version of libboost is 1.58
I have finished make all successfully,but I met the error during the make runtest.
I/usr/include/python2.7 -I/usr/lib64/python2.7/site-packages/numpy/core/include -I/usr/local/include -I/usr/include -I/usr/lib/x86_64-linux-gnu/hdf5/serial/include -I.build_release/src -I./src -I./include -I/usr/local/cuda/include -I/opt/intel/mkl/include -Wall -Wno-sign-compare -L/usr/lib64 -L/usr/local/lib -L/usr/lib -L/usr/lib/x86_64-linux-gnu -L/usr/lib/x86_64-linux-gnu/hdf5/serial -L/usr/local/cuda/lib64 -L/usr/local/cuda/lib -L/opt/intel/mkl/lib/intel64 -L.build_release/lib -lcudart -lcublas -lcurand -lglog -lgflags -lprotobuf -lleveldb -lsnappy -llmdb -lboost_system -lhdf5_hl -lhdf5 -lm -lopencv_core -lopencv_highgui -lopencv_imgproc -lboost_thread -lstdc++ -lcudnn -lmkl_rt -lcaffe -Wl,-rpath,\$ORIGIN/../lib .build_release/src/caffe/test/test_gradient_based_solver.o:在函数‘caffe::MakeTempDir(std::cxx11::basic_string<char, std::char_traits, std::allocator >*)’中:
test_gradient_based_solver.cpp:(.text._ZN5caffe11MakeTempDirEPNSt7 cxx1112basic_stringIcSt11char_traitsIcESaIcEEE[_ZN5caffe11MakeTempDirEPNSt7cxx1112basic_stringIcSt11char_traitsIcESaIcEEE]+0x77):对‘boost::filesystem::detail::temp_directory_path(boost::system::error_code*)’未定义的引用
test_gradient_based_solver.cpp:(.text._ZN5caffe11MakeTempDirEPNSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEE[_ZN5caffe11MakeTempDirEPNSt7cxx1112basic_stringIcSt11char_traitsIcESaIcEEE]+0xab):对‘boost::filesystem::path::operator/=(boost::filesystem::path const&)’未定义的引用
test_gradient_based_solver.cpp:(.text._ZN5caffe11MakeTempDirEPNSt7cxx1112basic_stringIcSt11char_traitsIcESaIcEEE[_ZN5caffe11MakeTempDirEPNSt7cxx1112basic_stringIcSt11char_traitsIcESaIcEEE]+0x128):对‘boost::filesystem::detail::unique_path(boost::filesystem::path const&, boost::system::error_code*)’未定义的引用
test_gradient_based_solver.cpp:(.text._ZN5caffe11MakeTempDirEPNSt7cxx1112basic_stringIcSt11char_traitsIcESaIcEEE[_ZN5caffe11MakeTempDirEPNSt7cxx1112basic_stringIcSt11char_traitsIcESaIcEEE]+0x166):对‘boost::filesystem::detail::create_directory(boost::filesystem::path const&, boost::system::error_code)’未定义的引用
.build_release/src/caffe/test/test_hdf5_output_layer.o:在函数‘caffe::MakeTempFilename(std::__cxx11::basic_string<char, std::char_traits, std::allocator > )’中:
test_hdf5_output_layer.cpp:(.text._ZN5caffe16MakeTempFilenameEPNSt7cxx1112basic_stringIcSt11char_traitsIcESaIcEEE[_ZN5caffe16MakeTempFilenameEPNSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEE]+0x86):对‘boost::filesystem::detail::temp_directory_path(boost::system::error_code*)’未定义的引用
test_hdf5_output_layer.cpp:(.text._ZN5caffe16MakeTempFilenameEPNSt7cxx1112basic_stringIcSt11char_traitsIcESaIcEEE[_ZN5caffe16MakeTempFilenameEPNSt7cxx1112basic_stringIcSt11char_traitsIcESaIcEEE]+0xb9):对‘boost::filesystem::path::operator/=(boost::filesystem::path const&)’未定义的引用
test_hdf5_output_layer.cpp:(.text._ZN5caffe16MakeTempFilenameEPNSt7cxx1112basic_stringIcSt11char_traitsIcESaIcEEE[_ZN5caffe16MakeTempFilenameEPNSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEE]+0x134):对‘boost::filesystem::detail::unique_path(boost::filesystem::path const&, boost::system::error_code*)’未定义的引用
collect2: error: ld returned 1 exit status
Makefile:540: recipe for target '.build_release/test/test_all.testbin' failed
make: *** [.build_release/test/test_all.testbin] Error 1
Tried solutions
I have tried to installed boost,but it does not work well.
System configuration
This is my Makefile.config
cuDNN acceleration switch (uncomment to build with cuDNN).
USE_CUDNN := 1
CPU-only switch (uncomment to build without GPU support).
CPU_ONLY := 1
uncomment to disable IO dependencies and corresponding data layers
USE_OPENCV := 0 USE_LEVELDB := 0 USE_LMDB := 0
uncomment to allow MDB_NOLOCK when reading LMDB files (only if necessary)
You should not set this flag if you will be reading LMDBs with any
possibility of simultaneous read and write
ALLOW_LMDB_NOLOCK := 1
Uncomment if you're using OpenCV 3
OPENCV_VERSION := 3
To customize your choice of compiler, uncomment and set the following.
N.B. the default for Linux is g++ and the default for OSX is clang++
CUSTOM_CXX := g++
CUDA directory contains bin/ and lib/ directories that we need.
CUDA_DIR := /usr/local/cuda
On Ubuntu 14.04, if cuda tools are installed via
"sudo apt-get install nvidia-cuda-toolkit" then use this instead:
CUDA_DIR := /usr
CUDA architecture setting: going with all of them.
For CUDA < 6.0, comment the *_50 lines for compatibility.
CUDA_ARCH := -gencode arch=compute_20,code=sm_20 \ -gencode arch=compute_20,code=sm_21 \ -gencode arch=compute_30,code=sm_30 \ -gencode arch=compute_35,code=sm_35 \ -gencode arch=compute_50,code=sm_50 \ -gencode arch=compute_50,code=compute_50
BLAS choice:
atlas for ATLAS (default)
mkl for MKL
open for OpenBlas
BLAS := mkl
Custom (MKL/ATLAS/OpenBLAS) include and lib directories.
Leave commented to accept the defaults for your choice of BLAS
(which should work)!
BLAS_INCLUDE := /opt/intel/mkl/include BLAS_LIB := /opt/intel/mkl/lib/intel64
Homebrew puts openblas in a directory that is not on the standard search path
BLAS_INCLUDE := $(shell brew --prefix openblas)/include
BLAS_LIB := $(shell brew --prefix openblas)/lib
This is required only if you will compile the matlab interface.
MATLAB directory should contain the mex binary in /bin.
MATLAB_DIR := /usr/local
MATLAB_DIR := /Applications/MATLAB_R2012b.app
NOTE: this is required only if you will compile the python interface.
We need to be able to find Python.h and numpy/arrayobject.h.
PYTHON_INCLUDE := /usr/include/python2.7 /usr/lib64/python2.7/site-packages/numpy/core/include
Anaconda Python distribution is quite popular. Include path:
Verify anaconda location, sometimes it's in root.
ANACONDA_HOME := $(HOME)/anaconda
PYTHON_INCLUDE := $(ANACONDA_HOME)/include \
We need to be able to find libpythonX.X.so or .dylib.
PYTHON_LIB := /usr/lib64
PYTHON_LIB := $(ANACONDA_HOME)/lib
Homebrew installs numpy in a non standard path (keg only)
PYTHON_INCLUDE += $(dir $(shell python -c 'import numpy.core; print(numpy.core.file)'))/include
PYTHON_LIB += $(shell brew --prefix numpy)/lib
Uncomment to support layers written in Python (will link against Python libs)
WITH_PYTHON_LAYER := 1
Whatever else you find you need goes here.
INCLUDE_DIRS := $(PYTHON_INCLUDE) /usr/local/include /usr/include /usr/lib/x86_64-linux-gnu/hdf5/serial/include LIBRARY_DIRS := $(PYTHON_LIB) /usr/local/lib /usr/lib /usr/lib/x86_64-linux-gnu /usr/lib/x86_64-linux-gnu/hdf5/serial
If Homebrew is installed at a non standard location (for example your home directory) and you use it for general dependencies
INCLUDE_DIRS += $(shell brew --prefix)/include
LIBRARY_DIRS += $(shell brew --prefix)/lib
Uncomment to use
pkg-config
to specify OpenCV library paths.(Usually not necessary -- OpenCV libraries are normally installed in one of the above $LIBRARY_DIRS.)
USE_PKG_CONFIG := 1
BUILD_DIR := build DISTRIBUTE_DIR := distribute
Uncomment for debugging. Does not work on OSX due to https://github.com/BVLC/caffe/issues/171
DEBUG := 1
The ID of the GPU that 'make runtest' will use to run unit tests.
TEST_GPUID := 0
enable pretty build (comment to see full commands)
Q ?= @
Thanks!