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BackofenLab / IntaRNA

Efficient target prediction incorporating accessibility of interaction sites
https://backofenlab.github.io/IntaRNA/
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[doc] extend subopt discussion #188

Open martin-raden opened 4 years ago

martin-raden commented 4 years ago

tackle user feedback:

The only aspect I think confused me was whether sub-optimal matches were talking only about the same position in the UTR/miRNA - with differences in binding within this, or whether you would report just the top hit for each mRNA sequence, unless sub-optimal positions were enabled. Ie. would I get back more than one hit per mRNA in different positions along the mRNA or not