BaderLab / EnrichmentMapApp

The EnrichmentMap Cytoscape App allows you to visualize the results of gene-set enrichment as a network.
http://apps.cytoscape.org/apps/enrichmentmap
GNU Lesser General Public License v2.1
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Empty chart on PA nodes. #395

Closed mikekucera closed 4 years ago

mikekucera commented 4 years ago
Screen Shot 2020-02-13 at 2 38 17 PM

There's a grey circle obstructing PA nodes. Its basically an empty pie chart. If you turn off charts (set Chart Data: none) then you can see the full node.

mikekucera commented 4 years ago

Still happens when switching chart types from the control panel.

mikekucera commented 4 years ago

Actually it seems to happen when you save the session and reopen it. Somehow the bypass on the signature nodes that hides the chart is removed.

mikekucera commented 4 years ago

Its actually caused by the filter task, it removes charts so that setting the transparency on the node will work, but it isn't restoring the chart bypass on signature nodes.