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BaderLab / EnrichmentMapApp

The EnrichmentMap Cytoscape App allows you to visualize the results of gene-set enrichment as a network.
http://apps.cytoscape.org/apps/enrichmentmap
GNU Lesser General Public License v2.1
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Update the read the docs tutorial to use updated GSEA data #456

Closed risserlin closed 1 year ago

risserlin commented 3 years ago

GSEA changed the format of their files. If users try and run gsea with the data and then go through the tutorial EM won't recognize their files.
This might be fixed with the release of EM 3.3.2 but still good to update the GSEA results associated with the tutorial.

https://enrichmentmap.readthedocs.io/en/latest/QuickTour.html

mikekucera commented 1 year ago

Possibly use the GSEAtutoria_4.1 data that I have.

mikekucera commented 1 year ago

Done