enrichment results with a few NA values (generated using fGSEA) - with 100 plus datasets - was difficult to find the dataset that was the issue as the error message does not specify. For my case it was one dataset out of 400!
first error -
Click on close and the following box appears -
Click on continue and the EM looks like it continues building (but it actually starts over)
goes back to first error - repeats, repeats and repeats. Assuming it is infinitely
If you run the same thing through rest, the build just aborts with null error.
enrichment results with a few NA values (generated using fGSEA) - with 100 plus datasets - was difficult to find the dataset that was the issue as the error message does not specify. For my case it was one dataset out of 400!
first error -
Click on close and the following box appears -
Click on continue and the EM looks like it continues building (but it actually starts over) goes back to first error - repeats, repeats and repeats. Assuming it is infinitely
If you run the same thing through rest, the build just aborts with null error.
Example dataset - TCGA-24-0966_fgsea_enr_results.txt TCGA-24-0966fakeexpression.txt