HLA genes have wrong controlled vocabulary in recommendations (Pharmacogenetics) report

BaderLab / GenomeClinic-PGX

Web application for clinical pharmacogenomic interpretation

GNU Lesser General Public License v3.0

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HLA genes have wrong controlled vocabulary in recommendations (Pharmacogenetics) report #187

Open gbader opened 8 years ago

gbader commented 8 years ago

HLA genes are supposed to be of type 'immune' (they are in the database), but in the Pharmacogenetics report, they are being considered of type 'metabolizer' - this affects the drop down menu that specifies their effect.

maxkfranz commented 8 years ago

From a previous meeting, this seems to be a data issue, e.g. https://github.com/BaderLab/GenomeClinic-PGX/blob/dev/src/server/conf/pgx_genes.json#L291