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BaderLab
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Tempora
Pathway-based trajectory inference method for time-series scRNAseq data
MIT License
25
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6
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Seurat v5
#25
hernandezvargash
opened
1 year ago
0
Installation problem
#24
AndreaYCT
closed
1 year ago
0
Error in BuildTrajectory
#23
eflynnFive
closed
2 years ago
3
Error in CalculatePWProfiles due to GSEABase::getGmt
#22
zandigohar
closed
2 years ago
2
Cannot download example MouseCortex Rdata
#21
hk20013106
closed
2 years ago
2
No significant time-varying pathways in MouseCortex Data
#20
mjoppich
opened
3 years ago
2
some minor modifications to make it with SCHNAPPs and speed ups.
#19
baj12
opened
3 years ago
0
GSVA version
#18
baj12
closed
3 years ago
2
getMD from SingleCellExperiment object
#17
baj12
opened
3 years ago
1
readme.md comments
#16
baj12
closed
3 years ago
3
Analyze multi-modal time-series Seurat object
#15
rbatorsky
opened
3 years ago
0
CalculatePWProfiles issue - invalid class "GeneSetCollection" object
#14
sciotlos
opened
3 years ago
1
Cholmod error 'problem too large'
#13
sciotlos
opened
3 years ago
2
Trouble with BuildTrajectory
#12
margaret-ho
closed
3 years ago
5
Error BuildTrajectory
#11
ccruizm
closed
4 years ago
2
Error: object 'gams' not found in PlotVaryingPWs()
#10
kevincjnixon
closed
4 years ago
1
Error: object 'plot_df' not found in IdentifyVaryingPWs()
#9
zhangjiaobxy
closed
4 years ago
3
Problem with IdentifyVaryingPWs
#8
DustinSokolowski
closed
4 years ago
2
Bug with Seurat clusters
#7
piplus2
closed
4 years ago
0
Hi, I am getting now a new error when trying to plot trajectory
#6
nmalwinka
closed
4 years ago
1
Error in IdentifyVaryingPWs()
#5
Pestudkaru
closed
4 years ago
4
problem with running CalculatePWProfiles
#4
nmalwinka
opened
4 years ago
3
Support for SingleCellExperiment and all Seurat versions
#3
innesbre
closed
4 years ago
0
GSVA parallel.sz argument throws error
#2
innesbre
closed
4 years ago
1
Tempora only compatible with SeuratV2
#1
DustinSokolowski
closed
4 years ago
1