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BaderLab / saber

Saber is a deep-learning based tool for information extraction in the biomedical domain. Pull requests are welcome! Note: this is a work in progress. Many things are broken, and the codebase is not stable.
https://baderlab.github.io/saber/
MIT License
102 stars 17 forks source link

Fix Bert Preprocessing #133

Closed JohnGiorgi closed 5 years ago

JohnGiorgi commented 5 years ago

BERTs preprocessing is incomplete (I followed a blog to implement it, which missed some important steps).

I wrote a preprocessing pipeline for our QA project. Implement that same pipeline in Saber.