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BaderLab / scClustViz

Explore and share your scRNAseq clustering results
https://baderlab.github.io/scClustViz/
MIT License
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Marker combinations? #20

Open innesbre opened 5 years ago

innesbre commented 5 years ago

Think about sets of genes that uniquely mark clusters (ie. CD4+ CD8-), rather than single gene markers.

innesbre commented 5 years ago

See https://arxiv.org/pdf/1407.1176.pdf and http://www-ikn.ist.hokudai.ac.jp/~arim/papers/komikdd2017draft.pdf

innesbre commented 5 years ago

This should probably be combined with the ability to restrict testing to gene sets (ie TFs, surface proteins),