Closed morrolinux closed 2 years ago
Here's my full environment:
# packages in environment at /home/morro/anaconda3/envs/KM3D:
#
# Name Version Build Channel
_libgcc_mutex 0.1 main
_openmp_mutex 4.5 1_gnu
absl-py 0.14.1 pypi_0 pypi
albumentations 1.1.0 pypi_0 pypi
blas 1.0 mkl
ca-certificates 2021.7.5 h06a4308_1
cachetools 4.2.4 pypi_0 pypi
certifi 2021.5.30 py36h06a4308_0
cffi 1.14.5 py36h261ae71_0
charset-normalizer 2.0.6 pypi_0 pypi
coco 0.0.0 pypi_0 pypi
cuda100 1.0 0 pytorch
cycler 0.10.0 pypi_0 pypi
cython 0.29.23 pypi_0 pypi
dataclasses 0.8 pypi_0 pypi
dcnv2 0.1 dev_0 <develop>
decorator 4.4.2 pypi_0 pypi
easydict 1.9 pypi_0 pypi
fire 0.4.0 pypi_0 pypi
freetype 2.10.4 h5ab3b9f_0
google-auth 1.35.0 pypi_0 pypi
google-auth-oauthlib 0.4.6 pypi_0 pypi
grpcio 1.41.0 pypi_0 pypi
idna 3.2 pypi_0 pypi
imageio 2.9.0 pypi_0 pypi
importlib-metadata 4.8.1 pypi_0 pypi
intel-openmp 2021.2.0 h06a4308_610
iou3d 0.0.0 pypi_0 pypi
joblib 1.0.1 pypi_0 pypi
jpeg 9b h024ee3a_2
kiwisolver 1.3.1 pypi_0 pypi
lcms2 2.12 h3be6417_0
ld_impl_linux-64 2.35.1 h7274673_9
libffi 3.3 he6710b0_2
libgcc-ng 9.3.0 h5101ec6_17
libgomp 9.3.0 h5101ec6_17
libpng 1.6.37 hbc83047_0
libstdcxx-ng 9.3.0 hd4cf53a_17
libtiff 4.2.0 h85742a9_0
libwebp-base 1.2.0 h27cfd23_0
llvmlite 0.36.0 pypi_0 pypi
lz4-c 1.9.3 h2531618_0
markdown 3.3.4 pypi_0 pypi
matplotlib 3.3.4 pypi_0 pypi
mkl 2020.2 256 anaconda
mkl-service 2.3.0 py36he8ac12f_0
mkl_fft 1.3.0 py36h54f3939_0
mkl_random 1.1.1 py36h0573a6f_0
ncurses 6.2 he6710b0_1
networkx 2.5.1 pypi_0 pypi
ninja 1.10.2 hff7bd54_1
numba 0.53.1 pypi_0 pypi
numpy 1.19.2 py36h54aff64_0
numpy-base 1.19.2 py36hfa32c7d_0
oauthlib 3.1.1 pypi_0 pypi
olefile 0.46 py36_0
opencv-python 4.0.0.21 pypi_0 pypi
opencv-python-headless 4.5.3.56 pypi_0 pypi
openssl 1.1.1l h7f8727e_0
pillow 8.2.0 py36he98fc37_0
pip 21.1.3 py36h06a4308_0
progress 1.5 pypi_0 pypi
protobuf 3.17.3 pypi_0 pypi
pyasn1 0.4.8 pypi_0 pypi
pyasn1-modules 0.2.8 pypi_0 pypi
pycocotools 2.0.2 pypi_0 pypi
pycparser 2.20 py_2
pyparsing 2.4.7 pypi_0 pypi
python 3.6.13 h12debd9_1
python-dateutil 2.8.1 pypi_0 pypi
pytorch 1.0.0 py3.6_cuda10.0.130_cudnn7.4.1_1 [cuda100] pytorch
pywavelets 1.1.1 pypi_0 pypi
pyyaml 5.4.1 pypi_0 pypi
qudida 0.0.4 pypi_0 pypi
readline 8.1 h27cfd23_0
requests 2.26.0 pypi_0 pypi
requests-oauthlib 1.3.0 pypi_0 pypi
rsa 4.7.2 pypi_0 pypi
scikit-image 0.17.2 pypi_0 pypi
scikit-learn 0.24.2 pypi_0 pypi
scipy 1.5.4 pypi_0 pypi
setuptools 52.0.0 py36h06a4308_0
shapely 1.7.1 pypi_0 pypi
six 1.16.0 pyhd3eb1b0_0
sqlite 3.36.0 hc218d9a_0
tensorboard 2.6.0 pypi_0 pypi
tensorboard-data-server 0.6.1 pypi_0 pypi
tensorboard-plugin-wit 1.8.0 pypi_0 pypi
tensorboardx 2.4 pypi_0 pypi
termcolor 1.1.0 pypi_0 pypi
threadpoolctl 3.0.0 pypi_0 pypi
tifffile 2020.9.3 pypi_0 pypi
tk 8.6.10 hbc83047_0
torchvision 0.2.1 py_2 pytorch
typing-extensions 3.10.0.2 pypi_0 pypi
urllib3 1.26.7 pypi_0 pypi
werkzeug 2.0.1 pypi_0 pypi
wheel 0.36.2 pyhd3eb1b0_0
xz 5.2.5 h7b6447c_0
zipp 3.6.0 pypi_0 pypi
zlib 1.2.11 h7b6447c_3
zstd 1.4.9 haebb681_0
perhaps you can share yours so I can double-check the versions for each seemingly relevant package?
Apparently I've messed up the environment because of a conda/pip incompatibility. Conda was always pointing to the pytorch installation I made with pip which is the wrong version.
pip uninstall pytorch torchvision
then removing and reinstalling those two with conda (conda install pytorch==1.0.0 torchvision==0.2.1 cuda100 -c pytorch
) fixed it.
Also keep in mind you should always re-build DCNv2
and iou3d
when switching pytorch versions or you'll get runtime linking issues due to unknown symbols.
Hi, I was able to run the training fine until the other day I had to re-install everything. I've followed the instructions as always but when I run:
I get:
Full log:
The code was working fine until re-install, so I'm guessing it could be caused by some new library version (but not the obvious ones since they are fixed in version as per instructions)
Does anyone have any clue on what's going on here?