NameError: name 'Ds' is not defined

BaselAbujamous / clust

Automatic and optimised consensus clustering of one or more heterogeneous datasets

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NameError: name 'Ds' is not defined #54

Closed dsjones552 closed 4 years ago

dsjones552 commented 4 years ago

Hi,

Im getting this error while running Clust through miniconda on my Macbook pro. See code attached. Extremely new to Python, so fully expect I did something wrong getting this job submitted and/or Clust installed. Thanks for any help!

Daniel

Clust_error.txt

aliceb5 commented 3 years ago

Hi there,

Could you share how you fixed this? I'm getting this error whenever I change the -d setting.

Thank you, Alice

dsjones552 commented 3 years ago

Alice,

I actually never got it fixed. I switched to a different program in R

Good luck with it though! Daniel

aliceb5 commented 3 years ago

I think I've figured it out. The -d setting seems to refers to the number of count matrices. So, in the example data with three datasets, you can only set it as high as 3.

I was (wrongly) thinking that this referred to samples (in my case, Illumina libraries)... and so I had set it at a number that was impossibly high. Hence getting an error that there are an improper number of D's!

Hopefully that helps someone else.

Alice