/===========================================================================\
| RESULTS SUMMARY |
+---------------------------------------------------------------------------+
| Clust received 1 dataset with 10338 unique genes. After filtering, 10338 |
| genes made it to the clustering step. Clust generated 3 clusters of |
| genes, which in total include 3463 genes. The smallest cluster includes |
| 357 genes, the largest cluster includes 2575 genes, and the average |
| cluster size is 1154 genes. |
+---------------------------------------------------------------------------+
Hello,
I'm trying clust but it seems I can't get de --no-fil-flat option for avoid gene filtering during pre-processing steps.
This is my line of code: $ clust input_file.txt --no-fil-flat -n0 -t 2 -cs 50 -o clust_7
Note: my input file is already normalized and consists of 10338 genes
\===========================================================================/
/===========================================================================\ | RESULTS SUMMARY | +---------------------------------------------------------------------------+ | Clust received 1 dataset with 10338 unique genes. After filtering, 10338 | | genes made it to the clustering step. Clust generated 3 clusters of | | genes, which in total include 3463 genes. The smallest cluster includes | | 357 genes, the largest cluster includes 2575 genes, and the average | | cluster size is 1154 genes. | +---------------------------------------------------------------------------+
Thanks!
Lucas