Open christabucao opened 3 months ago
I am trying to run clust using ExampleData/1_RawData. I have the following directory structure:
ls MapIDs.txt Normalisation.txt Replicates.txt data
ls data X1.txt X2.txt X3.txt
I ran clust using the command clust $data_path -r Replicates.txt -n Normalisation.txt -m MapIDs.txt
clust $data_path -r Replicates.txt -n Normalisation.txt -m MapIDs.txt
And I get the following error:
/===========================================================================\ | Clust | | (Optimised consensus clustering of multiple heterogenous datasets) | | Python package version 1.18.0 (2022) Basel Abu-Jamous | +---------------------------------------------------------------------------+ | Analysis started at: Tuesday 07 May 2024 (13:23:16) | | 1. Reading dataset(s) | | 2. Data pre-processing | | - Flat expression profiles filtered out (default in v1.7.0+). | | To switch it off, use the --no-fil-flat option (not recommended). | | Check https://github.com/BaselAbujamous/clust for details. | | 3. Seed clusters production (the Bi-CoPaM method) | | 10% | | 20% zsh: segmentation fault clust $data_path -r Replicates.txt -n Normalisation.txt -m MapIDs.txt
Any idea what may be going on here?
I am trying to run clust using ExampleData/1_RawData. I have the following directory structure:
I ran clust using the command
clust $data_path -r Replicates.txt -n Normalisation.txt -m MapIDs.txt
And I get the following error:
Any idea what may be going on here?