BaselAbujamous / clust

Automatic and optimised consensus clustering of one or more heterogeneous datasets
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Segmentation fault on example dataset #82

Open christabucao opened 3 months ago

christabucao commented 3 months ago

I am trying to run clust using ExampleData/1_RawData. I have the following directory structure:

ls
MapIDs.txt      Normalisation.txt   Replicates.txt      data
ls data
X1.txt  X2.txt  X3.txt

I ran clust using the command clust $data_path -r Replicates.txt -n Normalisation.txt -m MapIDs.txt

And I get the following error:

/===========================================================================\
|                                   Clust                                   |
|    (Optimised consensus clustering of multiple heterogenous datasets)     |
|           Python package version 1.18.0 (2022) Basel Abu-Jamous           |
+---------------------------------------------------------------------------+
| Analysis started at: Tuesday 07 May 2024 (13:23:16)                       |
| 1. Reading dataset(s)                                                     |
| 2. Data pre-processing                                                    |
|  - Flat expression profiles filtered out (default in v1.7.0+).            |
|    To switch it off, use the --no-fil-flat option (not recommended).      |
|    Check https://github.com/BaselAbujamous/clust for details.             |
| 3. Seed clusters production (the Bi-CoPaM method)                         |
| 10%                                                                       |
| 20%   
zsh: segmentation fault  clust $data_path -r Replicates.txt -n Normalisation.txt -m MapIDs.txt

Any idea what may be going on here?