Invalid initial heap size:

BauerLab / VariantSpark

VariantSpark is a framework for applying Spark-based Machine Learning methods to whole-genome variant information

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Invalid initial heap size: #1

Open Pavan637 opened 8 years ago

Pavan637 commented 8 years ago

Hello all, I am running example.conf file using Variant Spark shell script file. I have changed the driver memory from 1 to 6 GB (default). For all ranges of GB (1-6GB), I am getting "Invalid initial heap size:" Kindly suggest. I am running it on 64GB RAM linux machine

Pavan637 commented 8 years ago

I have set it to 512m.. Now the variantspark.sh is showing " java.lang.ClassNotFoundException: au.csiro.obr17q.variantspark.VcfClustering" error. And "variantspark-0.0.1-SNAPSHOT.jar" file is not created after mvn building in the target folder. Kindly suggest

BauerLab commented 7 years ago

Please use the new repository https://github.com/aehrc/VariantSpark