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Beckschen / TransUNet

This repository includes the official project of TransUNet, presented in our paper: TransUNet: Transformers Make Strong Encoders for Medical Image Segmentation.
Apache License 2.0
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image preprocess code #10

Closed AlphaJia closed 3 years ago

AlphaJia commented 3 years ago

Thanks for your great contribution！ Would u like to share your image preprocess code, that is get 3D image normalize and ertract 2D from 3D and then save to .npz file Thanks !

Beckschen commented 3 years ago

Hello, unfortunately there is no preprocessing code in this repo. But you can send an email (pls using gmail) to jienengchen01 AT gmail to get the access of preprocessed data directly.

AlphaJia commented 3 years ago

Thanks for your reply. Actually I want to train base on my own 3D dataset. Now I have change the dataset to online dataset_synapse.py script to online preprocess image, that is normalize image and extract 2D from 3D array. Now it works well!

Resse715 commented 3 years ago

Hi！Can you share your prepocess code? Thanks!

hdnminh commented 10 months ago

Hi @Resse715 Do you have the preprocess code, please share with me. Thanks in advance