hop-generate-hopgraph.py fails (networkx incompatibilities)

Becksteinlab / hop

Solvent network analysis. Hop is a python package based on MDAnalysis to analyze solvation dynamics.

https://hop.readthedocs.io

GNU General Public License v3.0

14 stars 5 forks source link

Closed orbeckst closed 6 years ago

orbeckst commented 6 years ago

hop-generate-hopgraph.py -f hoptraj.dcd -s hoptraj.psf analysis/water.pickle

fails with

...
    self._cache['sitelabels'].sort()
AttributeError: 'NodeView' object has no attribute 'sort'