MAINT, ENH: Make figure objects accessible

Becksteinlab / kda

Python package used for the analysis of biochemical kinetic diagrams.

GNU General Public License v3.0

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MAINT, ENH: Make figure objects accessible #79

Closed nawtrey closed 11 months ago

nawtrey commented 11 months ago

Description

Changes returns for all major plotting functions so the generated figures are returned when a save path is not specified. When many diagrams are input and panel=False, the figures are collected in a list and returned in the original order.
Adds arrows=True to nx.draw_networkx_edges() call to address issues with using curved_arrows with newer versions of networkx

nawtrey commented 11 months ago

These changes were inspired by recent struggles to access figures directly from the plotting functions, which really doesn't make sense from a user perspective. Previously it may have been convenient but is now a nuisance.