Settings:
Output files: "chocophlan_database.bt2.*.bt2l"
Line rate: 7 (line is 128 bytes)
Lines per side: 1 (side is 128 bytes)
Offset rate: 4 (one in 16)
FTable chars: 10
Strings: unpacked
Max bucket size: default
Max bucket size, sqrt multiplier: default
Max bucket size, len divisor: 4
Difference-cover sample period: 4000
Endianness: little
Actual local endianness: little
Sanity checking: disabled
Assertions: disabled
Random seed: 0
Sizeofs: void*:8, int:4, long:8, size_t:8
Input files DNA, FASTA:
chocophlan_database.ffn
Building a LARGE index
Reading reference sizes
Time reading reference sizes: 00:20:23
Calculating joined length
Writing header
Reserving space for joined string
Joining reference sequences
(mpa) [root@centos7-02-66b664b9d9-gz85w index]# ls
(mpa) [root@centos7-02-66b664b9d9-gz85w index]#
bowtie2-build chocophlan_database.ffn chocophlan_database.bt2 --large-index
(mpa) [root@centos7-02-66b664b9d9-gz85w index]#
ls