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BenMinch / BEREN

A comprehensive bioinformatic workflow for giant virus and Preplasmiviricota retrieval from metagenomes
MIT License
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Issues with NumPy #1

Open tenguzame opened 1 week ago

tenguzame commented 1 week ago

Greetings, I'm trying to use your pipeline, but it immediately fails throwing the following error:

`ImportError: Unable to import required dependencies: numpy:

IMPORTANT: PLEASE READ THIS FOR ADVICE ON HOW TO SOLVE THIS ISSUE!

Importing the numpy C-extensions failed. This error can happen for many reasons, often due to issues with your setup or how NumPy was installed.

We have compiled some common reasons and troubleshooting tips at:

https://numpy.org/devdocs/user/troubleshooting-importerror.html

Please note and check the following:

and make sure that they are the versions you expect. Please carefully study the documentation linked above for further help.

Original error was: No module named 'numpy.core._multiarray_umath' `

How do I fix it?

BenMinch commented 1 week ago

That is a strange error, but I think you can probably fix it by just reinstalling numpy with "pip install numpy". You may also want to make sure you setup the right environment as there are different ones for mac and linux.