Additional model: Casaletto, PNAS 2019

Benchmarking-Initiative / Benchmark-Models-PEtab

A collection of mathematical models with experimental data in the PEtab format as benchmark problems in order to evaluate new and existing methodologies for data-based modelling

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Additional model: Casaletto, PNAS 2019 #14

Open LoosC opened 5 years ago

LoosC commented 5 years ago

A new model in the d2d examples, potentially interesting to also implement it here? https://github.com/Data2Dynamics/d2d/tree/master/arFramework3/Examples/Casaletto_PNAS2019

dweindl commented 5 years ago

Let's see how far the d2d PEtab export will develop during the INCOME hackathon...

LeonardSchmiester commented 5 years ago

Do you know from which paper it is? Can't find any PNAS paper from 2019 with that author...

LoosC commented 5 years ago

no, maybe its not published yet?

LeonardSchmiester commented 5 years ago

Here it is: https://www.pnas.org/content/early/2019/03/20/1819085116.short?rss=1

LeonardSchmiester commented 4 years ago

@elbaraim you worked on this model, right?! The columns in the measurement file are mixed up. E.g. measurement values are in the simulationConditionId column etc.

LeonardSchmiester commented 4 years ago

The model is also in D2D I think. Maybe we can also try the D2D export here.