A collection of mathematical models with experimental data in the PEtab format as benchmark problems in order to evaluate new and existing methodologies for data-based modelling
Millard P, Smallbone K, Mendes P (2017) Metabolic regulation is sufficient for global and robust coordination of glucose uptake, catabolism, energy production and growth in Escherichia coli. PLOS Computational Biology 13(2): e1005396. https://doi.org/10.1371/journal.pcbi.1005396
Model available as SBML/CPS, data available in tabular form.
Millard P, Smallbone K, Mendes P (2017) Metabolic regulation is sufficient for global and robust coordination of glucose uptake, catabolism, energy production and growth in Escherichia coli. PLOS Computational Biology 13(2): e1005396. https://doi.org/10.1371/journal.pcbi.1005396
Model available as SBML/CPS, data available in tabular form.