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Benchmarking-Initiative / Benchmark-Models-PEtab

A collection of mathematical models with experimental data in the PEtab format as benchmark problems in order to evaluate new and existing methodologies for data-based modelling
BSD 3-Clause "New" or "Revised" License
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Fix pre-commit config #187

Closed dweindl closed 1 year ago

dweindl commented 1 year ago

Fix RuntimeError: The Poetry configuration is invalid -> https://stackoverflow.com/questions/75269700/pre-commit-fails-to-install-isort-5-11-4-with-error-runtimeerror-the-poetry-co

Fix invalid config (additional_dependencies) -> https://pre-commit.com/

Make flake8 happy.

Install PEtab extras -> https://github.com/PEtab-dev/libpetab-python/issues/212

dweindl commented 1 year ago

Remaining failure is due to https://github.com/PEtab-dev/libpetab-python/issues/213