Open LeonardSchmiester opened 4 years ago
This was about state-dependent noise, right? (https://github.com/ICB-DCM/AMICI/issues/609)
It's observable-dependent noise I think
@LeonardSchmiester Would you have the PEtab tables around (i.e. at least the data)? I would be interested in using the raw data and would not need the model itself
Ah, thank you, did not have a look at all the branches :)
Cannot validate the model with AMICI as the noise model is not supported yet.
Supported by https://github.com/AMICI-dev/AMICI/pull/1692, in case somebody feels like finishing this one.
I finished it and also did optimization again, ended up with a different optimum than the one from the matlab BenchmarkCollection but the fit is slightly better for two and worse for one other observable so I left the nominalParameters
that correspond to the other BenchmarkCollection.
Cannot validate the model with AMICI as the noise model is not supported yet.