Regenerate files for Monarch initiative

BgeeDB / bgee_pipeline

Source code of the Bgee pipeline used to build the Bgee database

https://bgee.org/

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Open fbastian opened 6 years ago

fbastian commented 6 years ago

The code to generate the files for Monarch need to be reactivated, and the files regenerated.

See org.bgee.pipeline.expression.downloadfile.GenerateRankFile.

fbastian commented 6 years ago

Summary:

Only presence of expression with ranks
One type of files with only anat. entities, one type of files with anat. entities and stages.
One file per species and data types (with one file being "all data types"), see org.bgee.pipeline.expression.downloadfile.GenerateRankFile.main(String[])