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BgeeDB / bgee_pipeline

Source code of the Bgee pipeline used to build the Bgee database
https://bgee.org/
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Bug #9

Closed julien-roux closed 5 years ago

julien-roux commented 5 years ago

https://github.com/BgeeDB/bgee_pipeline/blob/1cddf15123bcd3e7a318300f218c1a3ca8ce941c/pipeline/RNA_Seq/1Run/rna_seq_presence_absence.R#L259

With Sara we found a small bug affecting the presence/absence script. This should have very minor effect but still needs to be fixed. We should use <= instead of < in the line 259:

sum_by_species$tpm <= max_intergenic

SFonsecaCosta commented 5 years ago

bug fixed (develop branch) https://github.com/BgeeDB/bgee_pipeline/commit/c65682a0722dd49c75f2bdbe3790624a482353ab#diff-cdb34021075450040278bdfc475043d9