Add further Dimensionality Reduction Algorithms

BiAPoL / napari-clusters-plotter

A napari plugin for clustering objects according to their properties.

BSD 3-Clause "New" or "Revised" License

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Open Cryaaa opened 2 years ago

Cryaaa commented 2 years ago

Some more dimensionality reduction algorithms might be interesting for exploring other visualisations:

[ ] Diffusion maps: might be interesting since used in other developmental biology projects. Implementation here with MIT license
[x] ISOMAP and MDS: both in sklearn: easy implementation
[ ] SPRING plots (come from scSeq analysis and are more suited for continuums of expression states)
[ ] others? I'm open to suggestions here

lazigu commented 1 year ago

Added ISOMAP and MDS in #187