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BiGCAT-UM / KinRDF

Conversion of kinetic data to an RDF model, compatible with WikiPathways PathWayModels
MIT License
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interaction data model #19

Closed egonw closed 10 months ago

egonw commented 1 year ago

First, I think the separation between the measurement and the reaction model is great!

What about using predicates that explain the relation? So, not sio:SIO_000028 but something like SER:hasSubstracte, etc?

SER:306
    dc:identifier SER:17026-P05093-RHEA:46309 ;
    sio:SIO_000028  SER:306_substrate, SER:306_enzyme, SER:306_reaction ;
    sio:SIO_000008  SER:306_measurement ;
    rdf:type wp:InteractionData .