Zarr/H5 post-processing for instance segmentation

BiaPyX / BiaPy

Open source Python library for building bioimage analysis pipelines

https://BiaPyX.github.io

MIT License

114 stars 28 forks source link

Zarr/H5 post-processing for instance segmentation #41

Open danifranco opened 7 months ago

danifranco commented 7 months ago

We need to implement after_merge_patches_by_chunks_proccess_patch function (here). Instance creation needs to be done by patches and then merge. Example in cellpose code.