BigDataBiology / AMPSphereWebsite

Website for global antimicrobial peptides.
https://ampsphere.big-data-biology.org/home
MIT License
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Independent probabilities of helix, turn and sheet. #17

Closed AdeBC closed 3 years ago

AdeBC commented 3 years ago

From Biopython documentation (https://biopython.org/docs/1.76/api/Bio.SeqUtils.ProtParam.html), I noticed that the three probabilities of the helix, turn and sheet are independent. There is one amido acid 'L' that can involve in both helix and sheet. So, we cannot treat the resting probability as 'disordered'.

The secondary structure pie chart and error bars chart should be changed.

AdeBC commented 3 years ago

Should be fixed by https://github.com/BigDataBiology/AMPSphereWebsite/commit/9b567b1e2608d4fdfaa2d93088310a82d4b29515