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BigelowLab / edna-dada2

Maine eDNA dada2
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Citing the pipeline #29

Open robinsleith opened 1 year ago

robinsleith commented 1 year ago

What is the best way to acknowledge all the work @btupper has done on this pipeline? Should we be citing the github respository? Other ideas?

btupper commented 1 year ago

Well, citing a private repos is sort of a dead end. Or are you thinking of making it public? Isn't the citation about the other packages (dada2 etc)? I'm not sure that pipeline provides anything novel for science, it just gets things moving.

SeascapeScience commented 1 year ago

Here are the links to the zenodo / github stuff

https://guides.lib.berkeley.edu/citeyourcode

https://www.r-bloggers.com/2019/09/getting-a-doi-for-your-code/

robinsleith commented 1 year ago

And here is a reference example that might be useful https://academic.oup.com/gigascience/article/8/4/giy158/5241890. They use zenodo (code) and gigadb (data, not relevant for us yet)