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BilkentCompGen / mrfast

micro-read Fast Alignment Search Tool
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edit distance #2

Open lamevan opened 7 months ago

lamevan commented 7 months ago

Hi, I want to know

-e Maximum allowed edit distance (default 4% of the read length). When I set -e 5, it was set to 5% of the read length or 5 bp ?

Thank you very much!

calkan commented 7 months ago

-e 5 means 5bp

lamevan commented 7 months ago

Thank you!