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BinPro / CONCOCT

Clustering cONtigs with COverage and ComposiTion
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Improvements to the gen_input script #203

Closed alneberg closed 4 years ago

alneberg commented 5 years ago

Either run mosdepth, samtools idxstats or handle counts directly from kallisto/faidxstats.

alneberg commented 4 years ago

As of #222 the script is improved as it uses samtools with a bedfile.