Enforcing correct input for some scripts - Githubissues

BinPro / CONCOCT

Clustering cONtigs with COverage and ComposiTion

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Enforcing correct input for some scripts #264

Closed alneberg closed 5 years ago

alneberg commented 5 years ago

Enforce header line for input in merge_cutup_clustering.py
Enforce header line for input in extract_fasta_bins.py

For concoct_coverage_table.py

Enforce 'concoctpart' pattern in subcontig column of input bed file
Enforce 'concoctpart' not in original contig of input bed file

Fixes #242