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BioComputingUP / IDP-KG

Scripts and notebooks for generating and analysing the IDP-KG.
https://biocomputingup.github.io/IDP-KG/
Apache License 2.0
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Finalise namespace for identified concepts #15

Closed AlasdairGray closed 3 years ago

AlasdairGray commented 3 years ago

The initial prototype choose to generate protein identifiers in an entity path within the Bioschemas domain.

We should revisit this decision before we publish the knowledge graphs. Should we change to the IDP Central domain or keep Bioschemas? If we keep it in the Bioschemas domain should we create a subpart for proteins as we will need to choose another identifier scheme for other entity types or do we switch to using Wikidata IRIs, although this will require further work on the etl process?

AlasdairGray commented 3 years ago

We will change from the Bioschemas namespace https://bioschemas.org/entity/ to the IDP namespace https://idpcentral.org/id/.