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BioComputingUP / ring-pymol

This is the public repository for the RING PyMOL plugin developed by the BioComputing UP laboratory at the University of Padua
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"no such file or directory: '/tmp/tmp374jfdsld'" | set working dir in ring-plugin #7

Closed mhoppe-cau closed 1 year ago

mhoppe-cau commented 1 year ago

Hi, how can i set the working directory inside of the plugin? i installed the plugin as recommended via conda. but when i want to use it, i have to change the working directory of pymol to the temporary directory created by the ring-plugin. thx in advance! kind regards from Kiel Mathias

AlessioDelConte commented 1 year ago

Hi, can you give me some more information about your system where you are running PyMOL and if you are using the local version of RING or the API calls?

mhoppe-cau commented 1 year ago

Hi Alessio, fast reply! nice! :) we are using a local version on ubuntu with kernel 6.2.0-26 (22.04. desktop), i used the "Conda YAML (RECOMMENDED)." installation path kr mathias

AlessioDelConte commented 1 year ago

Ok it should be fine. It is strange that you have to change directory when using the plugin. When does the error occur? When starting the RING computation?

mhoppe-cau commented 1 year ago

alessio, i am sorry. i juste realised the error only occure when i open the plugin before loading the pdb in pymol. in fact, i could start the computation, but the visualisation failed, becasue pymol was not set to the right working directory. I just set the WD to the home dir, and saved this config in pymol. now everything works fine! sorry for bothering you and big thumbs up for the fast response!

AlessioDelConte commented 1 year ago

No problem, Thanks!