BioContainers / containers

Bioinformatics containers
http://biocontainers.pro
Apache License 2.0
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New container for Spark #535

Closed krokicki closed 10 months ago

krokicki commented 10 months ago

Spark

This is a container Apache Spark, a data execution engine. Scripts have been added to the base container to allow easy creation of transient clusters, i.e. by workflow systems like Nextflow.

This container is extended by the stitching-spark PR. Both this and the stitching-spark containers will be used by a new nf-core pipeline for lightsheet microscopy reconstruction.

Check BioContainers' Dockerfile specifications

Checklist

  1. Misc

    • [x] My tool doesn't exist in BioConda
    • [x] The image can be built
  2. Metadata

    • [x] LABEL base_image
    • [x] LABEL version
    • [x] LABEL software.version
    • [x] LABEL about.summary
    • [x] LABEL about.home
    • [x] LABEL about.license
    • [x] MAINTAINER
  3. Extra (optionals)

    • [ ] I have written tests in test-cmds.txt
    • [x] LABEL extra.identifier
    • [x] LABEL about.documentation
    • [x] LABEL about.license_file
    • [x] LABEL about.tags

    Check BioContainers' Dockerfile metadata

biocontainers-bot commented 10 months ago

about.summary label not present or too short

biocontainers-bot commented 10 months ago

Found a biotools entry matching the software name (https://bio.tools/spark), if this is the same software, please add the extra.identifiers.biotools label to your Dockerfile

biocontainers-bot commented 10 months ago

No test-cmds.txt (test file) present, skipping tests