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BioContainers / multi-package-containers

Testing building mulled containers for multi-requirement tools.
https://biocontainers.pro/#/multipackage
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Add 2 packages to existing container #3249

Closed LaurenceKuhl closed 3 weeks ago

LaurenceKuhl commented 3 weeks ago

hi sorry asked for a review too early :(

bgruening commented 3 weeks ago

No worries, but there are missing still a few versions.

LaurenceKuhl commented 3 weeks ago

hi @bgruening i'm trying to figure out the versions so create locally a conda environment with all packages i needed and then manually checked which versions of my R packages were installed there and then appended them to this commit, so i'm not sure why it's failing in the container? Is there any other way for me to figure out matching versions? Thanks a lot for any link towards any doc in case i missed something :)

bgruening commented 3 weeks ago

I did the same than you did conda create -n gasdf --dry-run r-base r-igraph r-dplyr r-tidyr r-readr r-ggplot2 and failed to write down the correct deps. As soon as I was able to write down what my eyes where seeing it worked :)