Closed simonrolph closed 1 year ago
Chris has a first draft of this done now, which I'll help get running in datalabs.
Model code to be added to github repository
Code working in labs now, just refactoring it slightly before pushing it here.
Alright, ready to upload now. @simonrolph where did we land on uploading though, I can't remember? Should we make a new repository in the BioDT org or just add it in this one?
Nice one @WillOnGit I think best to create a folder called recreation_model
in this repo and put it in there
Finally fixed the bug in the refactor. Haven't containerised or documented it yet but I think that's covered by other issues.
If the model is as simple as Chris says then could use these libraries to reimplement it:
terra for raster processing: https://cran.r-project.org/web/packages/terra/index.html sf for points https://r-spatial.github.io/sf/
Really need to get an understanding of how the model is implemented first. Could use outputs from old model as validation.
Would greatly improve ease of configuring new users, however currently a bit of an unknown about how long it would take to develop.